PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_3558_f_2
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family NZZ/SPL
Protein Properties Length: 342aa    MW: 36810.7 Da    PI: 8.8316
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_3558_f_2genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE64.92.3e-202121433185
         NOZZLE  33 geirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaa....isntatrlpvpvdrgvvlqgfps....... 117
                     e + e+ k+rgrkpgsk++ qk kkp  rgmgva+ler +++e  kk++     d+ s+       + t + lp p+    v+ g          
  Neem_3558_f_2  21 DEAKPEASKTRGRKPGSKATAQK-KKPPQRGMGVAQLERLRLQERWKKMTEMPPLDSLSIHNnfqyQPTTHSALPEPIPSVPVMHGAGNygvpiva 115
                    578899************99987.56778********************988888877665422225777888998877777777766667777** PP

         NOZZLE 118 .................slgssrilcggvgsgqvmi.......dpv.....ispwgfvetsatthelssisnpqm.ynassnnrcdtcf.kkkrld 182
                                       g+   + gg gsgqvm+       dp      +    ++  s t++elss++n q  +     +rc+ cf kkkr+ 
  Neem_3558_f_2 116 gggllgldqgivmhkvgHGGGFGGVSGGSGSGQVMMnhnrigvDPDlkvgqVGSSSLMSLSGTSKELSSMPNMQQpWALMPHERCNICFyKKKRFH 211
                    ***********999775444567789*********72222222453111112233456667799********87626667788*****94566665 PP

         NOZZLE 183 gdq 185
                     ++
  Neem_3558_f_2 212 EEN 214
                    544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087442.8E-1522212IPR014855Plant transcription factor NOZZLE
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048653Biological Processanther development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEKYTAATPS LENAVSSLAP DEAKPEASKT RGRKPGSKAT AQKKKPPQRG MGVAQLERLR  60
LQERWKKMTE MPPLDSLSIH NNFQYQPTTH SALPEPIPSV PVMHGAGNYG VPIVAGGGLL  120
GLDQGIVMHK VGHGGGFGGV SGGSGSGQVM MNHNRIGVDP DLKVGQVGSS SLMSLSGTSK  180
ELSSMPNMQQ PWALMPHERC NICFYKKKRF HEENIGIFHG VKDNYAQTSP TNGYGFAEMM  240
NHENNLNFNE GINGFGAFYV GHPILTNEAV VIHKNGKSMD RSVPREYEFF PGKVGRSTSL  300
KELEFPAEAS VAVCGEASCF TTTAYSANAA SNSVDLSLKL SL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2H5PSN62e-64A0A2H5PSN6_CITUN; Uncharacterized protein
STRINGXP_006464657.14e-69(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1863967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.11e-12sporocyteless (SPL)