PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_37916_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family bZIP
Protein Properties Length: 208aa    MW: 23774.8 Da    PI: 9.5229
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_37916_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.8e-11107165563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr +r+  NR +A+rsR+R++++i++L+++++  ea  +aL  ++++++ +++ lk+++
  Neem_37916_f_1 107 KRIKRLLANRASAQRSRLRRLEYIDKLKKEIDHEEARLSALSPQISRYETQYKLLKMKN 165
                     99*****************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-9103167IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.232105168IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.66E-10107162No hitNo description
Gene3DG3DSA:1.20.5.1704.6E-11107163No hitNo description
PfamPF001701.2E-9107165IPR004827Basic-leucine zipper domain
CDDcd147031.46E-11108157No hitNo description
PROSITE patternPS000360110125IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MLNRTKSFST SSCINIENSG LTTSTLASSQ LRAPPHRRSA SDSIALMRDP YFINLGNAGD  60
NFSPEGNLES YNGGDQNHHF NFSIGISDQK FIYPSENNHD VRCLDPKRIK RLLANRASAQ  120
RSRLRRLEYI DKLKKEIDHE EARLSALSPQ ISRYETQYKL LKMKNYEIKE KVEALENEKA  180
AKEAEFQALM EERVALQALA NQMHQKGK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015386694.13e-49basic leucine zipper 34-like
TrEMBLA0A2H5MVN07e-48A0A2H5MVN0_CITUN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1865168