PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_7067_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family bZIP
Protein Properties Length: 136aa    MW: 15630.8 Da    PI: 10.0205
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_7067_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97e-113785556
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                   +r ++++kNR++Arrs  RK+++ + L   vk L  eNk  +    +++k++
  Neem_7067_f_1 37 RRIKKLMKNRTSARRSWMRKQQKADDLSALVKRLCDENKHWRT---NMSKMY 85
                   799***********************************99884...444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.2E-53395IPR004827Basic-leucine zipper domain
PfamPF001703.1E-83683IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.03E-73788No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-83784No hitNo description
CDDcd147026.72E-93888No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MASDAGNSPS GSGMLPQSSA VPLTANDMQR LQVMEERRIK KLMKNRTSAR RSWMRKQQKA  60
DDLSALVKRL CDENKHWRTN MSKMYQAYFK EATEKSFLRL SANDGITDYG LSYGFYKTKP  120
AVNIAESDQL IEDYYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.12e-11basic leucine-zipper 2