PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Neem_7432_f_2

Organism

Azadirachta indica

Taxonomic ID

124943

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta

Family

BES1

Protein Properties

Length: 113aa MW: 12599.3 Da PI: 9.8924

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Neem_7432_f_2	genome	NGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	113.7	3e-35	20	90	6	76
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 +++ E+E++k+RER+RRai++ki+ GLR+ G+y+l raD+neVl+ L++eAGw+ve+DGttyr+ + + Neem_7432_f_2 20 VRSESEKEKTKLRERQRRAITTKIFHGLRKWGGYHLSPRADINEVLRELAKEAGWIVEPDGTTYRARVENE 90 67889************************************************************877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	8.0E-32	20	87	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence Send to blast
MKTTAAATSG GSGGGGVGGV RSESEKEKTK LRERQRRAIT TKIFHGLRKW GGYHLSPRAD 60 INEVLRELAK EAGWIVEPDG TTYRARVENE RKFCLFLGYC EKDSVFSGFC LWV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006468299.1	3e-41	protein BZR1 homolog 2-like isoform X1
Swissprot	O80831	1e-22	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A2H5N125	2e-39	A0A2H5N125_CITUN; Uncharacterized protein
TrEMBL	V4U899	2e-39	V4U899_9ROSI; Uncharacterized protein
STRING	XP_006468299.1	1e-40	(Citrus sinensis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM22944	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	1e-22	beta-amylase 7

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]