PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_8377_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family bZIP
Protein Properties Length: 385aa    MW: 42849.9 Da    PI: 8.0996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_8377_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254.1e-0888110325
                    XXCHHHCHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                    + k  rr+++NReAAr+sR+RKk
  Neem_8377_f_1  88 DAKTLRRLAQNREAARKSRLRKK 110
                    67999*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-583110No hitNo description
PfamPF077161.9E-487110IPR004827Basic-leucine zipper domain
PROSITE patternPS00036093108IPR004827Basic-leucine zipper domain
PfamPF141448.1E-32153227IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MRPPTLNIFP SQPMHVEPSS TSTKAAGTAL VSSTTSSSKR QSEPSMELAN ARNDAASATP  60
EAAKATKREG NRKGPTSSSE QEGPKTPDAK TLRRLAQNRE AARKSRLRKK GIFFGGVLGG  120
EQGVPVGING ISSEAAVFDM EYARWLEVHH RLMCELRAAV QEHLPENELR LFVENCLAHY  180
DEMMNLKIMV AKTDVFHLYS GMWKTPAERC FLWLGGFRPS ELIKVILNQI EPLTEQQILG  240
ICGLQQSTQE AEEALSQGLE ALNQSISDTI ASDSLSCPPN MTNYMGQMAM AMNKLSTLEG  300
FVRQNLFLAG FGNLTQFMNN YMPQFHSHEG DGCVAHADNL RHQTLHRLHQ ILTTRQAARC  360
LLAIAEYFHR LRALSSLWLA RPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006437046.10.0bZIP transcription factor TGA10 isoform X2
RefseqXP_006485023.10.0bZIP transcription factor TGA10 isoform X1
RefseqXP_006485024.10.0bZIP transcription factor TGA10 isoform X2
RefseqXP_024042622.10.0bZIP transcription factor TGA10 isoform X1
RefseqXP_024042623.10.0bZIP transcription factor TGA10 isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2H5Q7M00.0A0A2H5Q7M0_CITUN; Uncharacterized protein
TrEMBLV4TKH30.0V4TKH3_9ROSI; Uncharacterized protein
STRINGXP_006485023.10.0(Citrus sinensis)
STRINGXP_006437046.10.0(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-147bZIP family protein