PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Ctg00054g00001.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 107aa    MW: 11852.2 Da    PI: 10.5256
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Ctg00054g00001.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.11.9e-0780107233
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfsl 33 
                                y GVr +  +g+Wv+eIr+p++   + r++l
  Niben101Ctg00054g00001.1  80 SYVGVRKRA-WGKWVSEIREPKK---KSRIWL 107
                               79****887.**********854...588886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.25E-1279107No hitNo description
PROSITE profilePS5103212.28680107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-1180107IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-680107IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MAEPTTPNSE SESSSYNSCS LSSTISSSSV LIKNINSKNR LKRCREVAEE NDGQTNISKC  60
SNSSKKNGGN KTSDGSKHPS YVGVRKRAWG KWVSEIREPK KKSRIWL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009782186.13e-50PREDICTED: ethylene-responsive transcription factor TINY-like
RefseqXP_016440909.13e-50PREDICTED: ethylene-responsive transcription factor TINY-like
TrEMBLA0A1S3XM487e-49A0A1S3XM48_TOBAC; ethylene-responsive transcription factor TINY-like
TrEMBLA0A1U7WY007e-49A0A1U7WY00_NICSY; ethylene-responsive transcription factor TINY-like
STRINGXP_009782186.11e-49(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-13ERF family protein