PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf00085g03006.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 225aa MW: 25635.1 Da PI: 9.8073

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf00085g03006.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.4	1.7e-09	176	218	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +kr+rr++kNRe+A rsR+RK++e+++ +k++ + ++ ++L+ Niben101Scf00085g03006.1 176 DKRQRRMIKNRESAARSRARKQEETKKQPTKAQWIANKLRRLR 218 7************************998888877777766665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.8E-6	169	208	No hit	No description
Pfam	PF00170	5.8E-7	176	215	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.8E-5	177	219	No hit	No description
PROSITE pattern	PS00036	0	180	195	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MEVSENDSVD YCYKVNLETS PKMQAEPSEY HAISSSSRQN NSAFSLTLNE FQSKKGRNYG 60 SMNLDDLLNN FWDNEGNQVT PNSNQDVPTK EGQHSRYNNS KCAENGKGCA DSSSKHRQIF 120 EQVNGGFIKG HQNSDQMNTT NIENIENSNS ASDVSEPINN SRRRSSSVSL EATVMDKRQR 180 RMIKNRESAA RSRARKQEET KKQPTKAQWI ANKLRRLRRM SSVSW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774980.1	1e-120	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U7WL52	1e-119	A0A1U7WL52_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	XP_009774980.1	1e-120	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16902	4	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	1e-07	bZIP family protein