PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00152g18002.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 475aa    MW: 51873.2 Da    PI: 7.6006
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00152g18002.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.9e-11327385563
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  ++  l+k   +l s +
  Niben101Scf00152g18002.1 327 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTETTTLLTQVTILQKDFTELSSLN 385
                               9***********************************************99999998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575119No hitNo description
SMARTSM003383.2E-15323387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.082325388IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-11327382No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-11327384No hitNo description
PfamPF001701.2E-9327385IPR004827Basic-leucine zipper domain
CDDcd147036.21E-14328358No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MAQSNSKPPM SHNFGVGACH VRSLSQPSSF LNNCLPPLSP LPPSEPSMVS ANANLKDTSM  60
EEVDVNCQVP KVVSNFVREN ALRGSDSLPP RKGHRRSNSD VPLGFSDMIQ TSPQLMPISG  120
QRISGRPVNL GDISGREKTI DLQKQPMCLS NNGRIDVEGI GERKSRGEVT DELLFSCMNL  180
ENIEALNSSG TEDRDKGSMV SGTKVSGNES SNNEAESLSK GNNVSSQLTS LREGIKRSAD  240
ADIAPTMRHF RSLSMDSAIG GFHYGDESPK LPASLVNHSG QLSPSNSGNE SSSQRNFDFG  300
NAEFSEAEMK KIIADERLAE IAVADPKRAK RILANRQSAA RSKERKLRYI SELEYKVQKL  360
QTETTTLLTQ VTILQKDFTE LSSLNSELKF HVQAMEQQAQ LRDALHEALT SEVQRLKLTA  420
GELREEGRLP NSMIQHMLVK NNIFPMQRQQ PSQIQQLSVG KPATASSASA TPASA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244937.10.0PREDICTED: uncharacterized protein LOC109224841
RefseqXP_019244939.10.0PREDICTED: uncharacterized protein LOC109224841
TrEMBLA0A1J6IG020.0A0A1J6IG02_NICAT; Transcription factor rf2b
STRINGXP_009798752.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.38e-74bZIP family protein