PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00245g05008.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 209aa    MW: 24412.9 Da    PI: 10.3878
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00245g05008.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.8e-115795341
                              XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41
                              +lk+ rr  +NR++A+rsR +K ++i eLe+kvk L++ 
  Niben101Scf00245g05008.1 57 DLKKLRRTVSNRLSAQRSRIKKTEYITELEKKVKDLQKM 95
                              79**********************************875 PP
2bZIP_142.61.3e-13151207359
                               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                               +lk+ rr  +NR++A+rsR +K ++i eLe+kvk L+     L  e+e+ k++ ++l
  Niben101Scf00245g05008.1 151 DLKKLRRTVSNRLSAQRSRIKKTEYITELEKKVKDLQDTIAFLSPEIENHKEKQSTL 207
                               79**********************************************999987776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.002655119IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.15157106IPR004827Basic-leucine zipper domain
PfamPF001701.7E-95894IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-85896No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-95997No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
SMARTSM003384.0E-5149206IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.231151209IPR004827Basic-leucine zipper domain
PfamPF001701.2E-12152208IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-11152207No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-12153208No hitNo description
CDDcd147031.90E-9154198No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MEDKRKRSEP ELALSLKSPT DNQDELSVNR RKVPLTLDQA IDFELNKLGR NVDSDVDLKK  60
LRRTVSNRLS AQRSRIKKTE YITELEKKVK DLQKMEDKRK RSEPELALSL KSPTDNQDEL  120
SANRRKVPLT LDQAIDFELN KLGRNVDSDV DLKKLRRTVS NRLSAQRSRI KKTEYITELE  180
KKVKDLQDTI AFLSPEIENH KEKQSTLRM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009783967.11e-71PREDICTED: basic leucine zipper 19
RefseqXP_016471095.11e-71PREDICTED: basic leucine zipper 19-like
TrEMBLA0A1S4A3A83e-70A0A1S4A3A8_TOBAC; basic leucine zipper 19-like
TrEMBLA0A1U7WVP33e-70A0A1U7WVP3_NICSY; basic leucine zipper 19
STRINGXP_009783967.16e-71(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA76151929
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-09bZIP family protein