PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00505g04002.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 165aa    MW: 18992.7 Da    PI: 7.9898
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00505g04002.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000511330320
                              ETTTTEEESSHHHHHHHH CS
                   zf-C2H2  3 CpdCgksFsrksnLkrHi 20
                              C  C++ +++  +L+rHi
  Niben101Scf00505g04002.1 13 CRFCDQIYPNATTLMRHI 30
                              *****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MSPFGNELSV IACRFCDQIY PNATTLMRHI LDNECINMPQ FGNEPQNPNE VSFTVCQFCD  60
QICSDATGLM RHFIYDKCTM MALSSDGKSL IPRYEGYENV INFLHLTVSF IIKTQLFNLN  120
PCPRFHGLPP QNVPQRTREP QNRDINRIXS IFLAVKAFKA KMKNF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018630682.13e-89PREDICTED: uncharacterized protein LOC108947334