PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf02688g00009.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 655aa    MW: 73093.6 Da    PI: 6.7573
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf02688g00009.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3417.91.1e-127383731316
                               XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                      EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                               eel++rmwkd+++lkrlker+k     + +a++++++++ ++qarrkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+
  Niben101Scf02688g00009.1  38 EELERRMWKDRIKLKRLKERQKLA---ALKAAEKQNNKHVTDQARRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVS 119
                               8*******************9964...34457899999*********************************************** PP

                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HH CS
                      EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvep 170
                               gasd++raWWkekv+fd+ngpaai+ky+a+  + +++ ++  ++ +  + l++lqD+tlgSLLs+lmqhcdppqr++plekgv+p
  Niben101Scf02688g00009.1 120 GASDNIRAWWKEKVKFDKNGPAAIAKYEAESRAKGEGVGS--QNGNAGSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVSP 202
                               ********************************99988888..56888999*********************************** PP

                               HH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT CS
                      EIN3 171 PWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeek 255
                               PWWPtG+e+ww++ gl+k q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+ qsk+lqdkm+akes ++l+vl++ee+
  Niben101Scf02688g00009.1 203 PWWPTGNEEWWSKTGLPKGQN-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLVHQSKCLQDKMTAKESSIWLAVLSKEES 286
                               *********************.9*************************************************************9 PP

                               -S--XXXX..XX......XXXXXXXXXXXXXXXXXXXX.........XXXXXX.XXXXXXXXXX....................X CS
                      EIN3 256 ecatvsah..ss......slrkqspkvtlsceqkedve.........gkkeskikhvqavktta....................g 303
                                ++   ++  ss       +r++++k  +s+++++dv+                   +++++++                    g
  Niben101Scf02688g00009.1 287 VLQLPGSEngSSsieppaRSRSEKKKPSVSSDSEYDVDgiddgigcvS---------SKDERRNqpldvhplnvipqshqskeqG 362
                               988777776533678877778899999999********5444433331.........3333333455555555555555444321 PP

                               XXXXXXXXXXXXX CS
                      EIN3 304 fpvvrkrkkkpse 316
                                   r rk+k+++
  Niben101Scf02688g00009.1 363 --DGRHRKRKRAR 373
                               ..12222222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.3E-12438285No hitNo description
Gene3DG3DSA:1.10.3180.105.1E-70163288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.75E-61167287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    Send to blast
MAVIDEIGVD VSSDIEVDDI RCDNIAEKDV SDEEIEPEEL ERRMWKDRIK LKRLKERQKL  60
AALKAAEKQN NKHVTDQARR KKMSRAQDGI LKYMLKLMEV CNARGFVYGI IPDKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAIAKYEAES RAKGEGVGSQ NGNAGSVLQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV SPPWWPTGNE EWWSKTGLPK GQNPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKIRRLVH QSKCLQDKMT AKESSIWLAV LSKEESVLQL PGSENGSSSI  300
EPPARSRSEK KKPSVSSDSE YDVDGIDDGI GCVSSKDERR NQPLDVHPLN VIPQSHQSKE  360
QGDGRHRKRK RARSNPTEQQ ILPSLRHGDD HSNSSPDTNS SESLRENDKS GAPKPVENSI  420
LTQSELPLQD SNLSLVMSAN VVSIEDAYIG TGPSLYPLHQ NSAVVPYESG VHLESQDSAV  480
RHQFHDAQLH GHHKIPGIKY GPRNSHLHYG SHSSVVHTEL QVSGFAHGSQ ISNFNQPPLY  540
HSYSSAEFEF THEKPQSQMA CNERPIRPRD SGVGSLLHGS GNNISVDNHQ YEKDMSQNNH  600
DRHIEMPFPS PLTIGSPDYA TLGSPFDLGL DVQSYLDNTD FDLDFDKEMM SFFAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-7116729611140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016477203.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-169EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S4AL790.0A0A1S4AL79_TOBAC; ETHYLENE INSENSITIVE 3-like 3 protein
STRINGPGSC0003DMT4000551020.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-149ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]