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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Niben101Scf03111g01002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
GATA |
| Protein Properties |
Length: 204aa MW: 23389.5 Da PI: 7.6857 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Niben101Scf03111g01002.1 | genome | BTI | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 25.3 | 2.2e-08 | 182 | 201 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20
C+ C+tt+TplWR+g g+k
Niben101Scf03111g01002.1 182 CADCNTTTTPLWRSGLKGPK 201
***************99987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MTPTDHMTNS TPPPFRFLLN NEDYDLNNSL VSPHNNYQAS SSYSYSSPYQ FFFNSTTNQN 60
QTGYYHRDEY HTPLHQPEGD NEGGSYEVDM KNKVGNGLKL TLWKRKDKYH ENQNQKHTVK 120
WMSSKIKASD QTSMENTTNN TSIKLKLEDQ KKQQPSYPLE STDYSSNSSN NSSNNNIPIR 180
VCADCNTTTT PLWRSGLKGP KVPE
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