PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04173g03012.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 83aa MW: 9983.26 Da PI: 10.9608

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04173g03012.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.8	2e-07	37	76	17	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ArrsR RK++++ e + +L ++N+ ++++++ + + Niben101Scf04173g03012.1 37 ARRSRMRKQQRLREFMSETTQLHKQNSIFRERIDSVERNR 76 9*********************************988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.6E-5	37	75	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 83 aa Download sequence Send to blast
MAANVKKKEV VASDADQQYA KFDERIKEDG EGRLDRARRS RMRKQQRLRE FMSETTQLHK 60 QNSIFRERID SVERNRKSTI IRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	44	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019235074.1	1e-25	PREDICTED: bZIP transcription factor 53-like
TrEMBL	E1VCY1	2e-24	E1VCY1_NICBE; BZIP transcription factor (Fragment)
STRING	XP_009784433.1	2e-24	(Nicotiana sylvestris)