PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf04473g06001.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 225aa    MW: 25427.9 Da    PI: 8.8848
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf04473g06001.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.5e-132576556
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                              k+ +r+++NRe+ArrsR +K+  ++eL+++v +L+a N++   ++ee ++  
  Niben101Scf04473g06001.1 25 KKRKRMISNRESARRSRMKKQNLVQELTKEVSKLQAANRTIVAKIEETTERL 76
                              899************************************9999999887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-142185IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-112380No hitNo description
PROSITE profilePS5021710.3352376IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.97E-102578No hitNo description
PfamPF001701.3E-102575IPR004827Basic-leucine zipper domain
CDDcd147026.36E-142676No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MSALRQSGSS SASERDQRYA CMDEKKRKRM ISNRESARRS RMKKQNLVQE LTKEVSKLQA  60
ANRTIVAKIE ETTERLTYCT AQHNVLRAQE TELTDRLKSL NDLINHSGLV TDVTNVADCL  120
LKPWQITCSM QQISASSGFK LQAANRTIVA KIEETTERLT YCTAQHNVLR AQETELTDRL  180
KSLNDLINHS GLVTDVTNVA DCLLKPWQIT CSMQQISASS GLFQY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255239.14e-91PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1J6HZ841e-89A0A1J6HZ84_NICAT; Bzip transcription factor 53
STRINGXP_009779504.14e-90(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA111261525
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.19e-34basic region/leucine zipper motif 53