PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04614g07005.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 296aa MW: 33729.2 Da PI: 8.2707

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04614g07005.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.9	2.1e-08	154	200	15	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +A rsR RK++ i+eLe+ v++L+ae ++L ele l ++ l + Niben101Scf04614g07005.1 154 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELEFLDQQNIILSM 200 69**********************************99988765555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	3.66E-13	145	196	No hit	No description
SMART	SM00338	5.8E-6	145	204	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.4E-9	154	198	No hit	No description
SuperFamily	SSF57959	3.77E-7	154	198	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MLILDSTSEG SGSGSDHHHR CNSESFLIEE QPSWLDDLLN EPAETVAVHK GHRRSASDTF 60 AYVGTAAERL NTRENNNNVN VGGSSINYVS YKDQFTSVSY DTKPTSAKAA LELNEKHSRQ 120 VISTQNKEGS NERSNNTQAK HAMSKADAKR AKQQSAHRSR VRKLQHIAEL ERTVQALQAE 180 GSELSAELEF LDQQNIILSM ENRALRQRLD SLSQEQLIKD LEQEMLEREL TRLQTLYQMQ 240 RQQMQQQQHQ QPQQQNQSKH RRNKSRDLEA QFANLSIKNN EASSSKFRLL VQSGCK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019242955.1	1e-172	PREDICTED: uncharacterized protein At4g06598-like isoform X2
TrEMBL	A0A1J6J2Y4	1e-170	A0A1J6J2Y4_NICAT; Basic leucine zipper 34
STRING	XP_009623359.1	1e-167	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11445	20	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	5e-39	bZIP family protein