PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04632g09012.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 331aa MW: 36336.9 Da PI: 9.5159

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04632g09012.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.5	4.6e-16	261	306	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +e Niben101Scf04632g09012.1 261 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RQKE 306 79**************************************99.4444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PRINTS	PR00041	2.0E-6	148	163	IPR001630	cAMP response element binding (CREB) protein
Gene3D	G3DSA:1.20.5.170	1.0E-15	251	304	No hit	No description
PRINTS	PR00041	2.0E-6	256	272	IPR001630	cAMP response element binding (CREB) protein
SMART	SM00338	3.5E-13	257	325	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	259	304	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.19E-23	261	306	No hit	No description
Pfam	PF00170	8.0E-13	261	304	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-10	261	306	No hit	No description
PROSITE pattern	PS00036	0	264	279	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	2.0E-6	274	294	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	2.0E-6	294	311	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MGSQGGGGGT SMGATQAQDP KPNALARQGS LYGLTLDEVQ NQLGDLGKPL SSMNLDELLK 60 TVWTVEASQG MGGTDYGALQ HSQVASGSSL HRQSSITLTG DLCKKTVDQV WQDIQQGQKR 120 DNSDRKTQER QRTLGEMTLE DFLVKAGVVA EPTPGKRSSS GSGLGGDSMA LPQQQAQWSH 180 YAMPQIPPQQ PQQQNMLPVF MPGHPVQQPL AVVANPIMDA AYPESQMTMS PTALLGTLSD 240 TQTLGRKRVA PEDVVEKTVE RRQKRMIKNR ESAARSRARK QAYTHELENK VSRLEEENER 300 LKRQKEIEKV LPSVPPPEPK YQLRRTSSAP F

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016492897.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-96	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1S4BVI8	0.0	A0A1S4BVI8_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_009614068.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-96	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]