PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf04664g01015.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 181aa    MW: 21096.6 Da    PI: 7.0276
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf04664g01015.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.52.7e-19101475128
                       NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekewyfFskrdkkyatgkrknrat 78 
                               +rF Ptd+e +  +L + +++k+++ + +  +++d+y   ePw++ +           +a+++++ +F+++ kk+++g  ++ + 
  Niben101Scf04664g01015.1  10 YRFLPTDSERL-TFLLRFIAEKEMDDSGFiTTNIDVYGGeEPWEIYNhgvpcgsddD-NADSSNYRYFITKLKKKSKGGYNREVG 92 
                               69********9.8899999999998888834566**98659****744677655421.223334446666666667777777799 PP

                       NAM  79 ksgyWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                               ++g Wk++ k k+v+ k  +  +     +g+kk+L + ++++ + +  +W+m+ey+l
  Niben101Scf04664g01015.1  93 NKGSWKQQDKAKSVHYKntG--NsslvvIGCKKSLCYVNKEHYNQNDGHWLMKEYEL 147
                               9**************98551..345566************999*9**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.6236170IPR003441NAC domain
SuperFamilySSF1019412.09E-1810168IPR003441NAC domain
PfamPF023651.9E-1210147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEQQLQEGYY RFLPTDSERL TFLLRFIAEK EMDDSGFITT NIDVYGGEEP WEIYNHGVPC  60
GSDDDNADSS NYRYFITKLK KKSKGGYNRE VGNKGSWKQQ DKAKSVHYKN TGNSSLVVIG  120
CKKSLCYVNK EHYNQNDGHW LMKEYELASV ILQKFDEDRR DYVLCAIKRM PHSTDYARSL  180
N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766553.11e-124PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7VJP91e-123A0A1U7VJP9_NICSY; NAC domain-containing protein 78-like
STRINGXP_009766553.11e-124(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-10NAC domain containing protein 90