PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf05540g00014.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 238aa MW: 26848.4 Da PI: 9.5465

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf05540g00014.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	117.9	1.5e-36	36	107	5	76
DUF822 5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 r p+ +Er +nk+RE +RRa+a ki+aGLRa Gny+lpk+aD n+ lkALc+ AGw ve+DGt yrk + + Niben101Scf05540g00014.1 36 RYPSDRERQKNKQREQKRRAVAHKIFAGLRARGNYELPKHADTNDLLKALCAKAGWHVEKDGTIYRKEKIST 107 889***************************************************************976554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	7.5E-33	36	116	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence Send to blast
MVTERTSVLG GCIKTSRGPW LVHKTTKDGS VVTRFRYPSD RERQKNKQRE QKRRAVAHKI 60 FAGLRARGNY ELPKHADTND LLKALCAKAG WHVEKDGTIY RKEKISTLLN IFAILKSGKD 120 MPRLVDVDSA QVSMEYQIND SDHYDHCKCE DQIKDGDYCK CAVDMNVTET ETARPEGSIT 180 PSAEVFNDVS TTFEIPAETN PPSGQRSGKS CDTRVGFSKK QRSWVAKRAR KTLYAACQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	8e-15	36	102	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	8e-15	36	102	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	8e-15	36	102	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	8e-15	36	102	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009797386.1	1e-104	PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like
TrEMBL	A0A1U7Y5Z4	1e-102	A0A1U7Y5Z4_NICSY; protein BRASSINAZOLE-RESISTANT 2-like
STRING	XP_009797386.1	1e-103	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	1e-18	BES1 family protein