PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf05750g01016.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 86aa    MW: 10067.4 Da    PI: 5.6026
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf05750g01016.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM262.6e-08271470
                       NAM  4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka..eekewyfFskrdkkyat 70
                              G  FhPtd  ++ +yL   v++++l++ +  ++++d+y   ePw++ ++++   ++k  yf ++++k+++t
  Niben101Scf05750g01016.1  2 GNLFHPTDRGVL-KYLLGFVRDEPLPCPNElMQQTDLYADeEPWQIFEAYDDhgTNKTRYFITPQKKEKST 71
                              778*******99.9**********88865559*****98659****7433332133456888888887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.2E-6269IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MGNLFHPTDR GVLKYLLGFV RDEPLPCPNE LMQQTDLYAD EEPWQIFEAY DDHGTNKTRY  60
FITPQKKEKS TWKVLHELLG RATGNL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019224265.17e-44PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A314KVH52e-42A0A314KVH5_NICAT; Uncharacterized protein
STRINGXP_009598748.14e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385