PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf05823g02011.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 62aa    MW: 7332.62 Da    PI: 11.1568
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf05823g02011.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.5e-121471059
                              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
                              + +NRe+ArrsR +K+  ++eL+++v +L+a N   + ++ + k+ +++l
  Niben101Scf05823g02011.1  1 MVSNRESARRSRMKKQNLVQELTKEVSKLQAAN---RINVAKTKEIIERL 47
                              579******************************...57778888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579595.69E-9148No hitNo description
PfamPF001701.5E-8143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-9237No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MVSNRESARR SRMKKQNLVQ ELTKEVSKLQ AANRINVAKT KEIIERLTFC TAQYLSKYLR  60
IF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009779504.12e-23PREDICTED: ocs element-binding factor 1-like
RefseqXP_009799077.19e-24PREDICTED: ocs element-binding factor 1-like
TrEMBLA0A1J6II011e-22A0A1J6II01_NICAT; Bzip transcription factor 11
TrEMBLA0A314L0B61e-22A0A314L0B6_NICAT; Bzip transcription factor 11
STRINGXP_009779504.18e-23(Nicotiana sylvestris)
STRINGXP_009799077.14e-23(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.18e-10G-box binding factor 6