PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf06112g01006.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 323aa    MW: 34846 Da    PI: 9.2487
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf06112g01006.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.94.6e-67121571150
                    DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                               g+sgr ptwkErEnnkrRERrRRaiaaki++GLRaqGn+klpk++DnneVlkALc eAGwvvedDGttyrkg +p+  +e +g+s
  Niben101Scf06112g01006.1  12 GSSGRLPTWKERENNKRRERRRRAIAAKIFTGLRAQGNFKLPKHCDNNEVLKALCLEAGWVVEDDGTTYRKGNRPP-PMENGGAS 95 
                               689*************************************************************************.******** PP

                    DUF822  86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                                ++s++ss+q s+ ss+ +s v+sy+asp+sssfpsps+ d ++    + +lp+l++l++++ssl
  Niben101Scf06112g01006.1  96 MNNSTCSSIQPSPMSSSYPSHVPSYHASPTSSSFPSPSRCDGNPP---SYILPFLHNLAYIPSSL 157
                               *****************************************9987...599******99999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.0E-6113136IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MTAAGDRMTS GGSSGRLPTW KERENNKRRE RRRRAIAAKI FTGLRAQGNF KLPKHCDNNE  60
VLKALCLEAG WVVEDDGTTY RKGNRPPPME NGGASMNNST CSSIQPSPMS SSYPSHVPSY  120
HASPTSSSFP SPSRCDGNPP SYILPFLHNL AYIPSSLPPL RVSNSAPVTP PLSSPTRNSN  180
PKPVWESLSS VPLHSFHHPL FAASAPSSPT RRQYSKPATI PECDESDVAS VVSARWGSFQ  240
TGAPSAAPTS PTFNLVKPIP QQNILLDALS GRGAFGWAEA AQKGHGSEFN FESCKVMAWE  300
GERIHEVAVD DLELTLGSGK PRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-261695372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-261695372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-261695372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-261695372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009765795.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
RefseqXP_016496466.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A432e-97BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A1S4C5I20.0A0A1S4C5I2_TOBAC; BES1/BZR1 homolog protein 2-like
TrEMBLA0A1U7VV570.0A0A1U7VV57_NICSY; BES1/BZR1 homolog protein 2-like
STRINGXP_009765795.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94862128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.34e-83BES1 family protein