PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf06223g00023.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 270aa MW: 31482.5 Da PI: 4.5836

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf06223g00023.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	72.9	7.9e-23	5	125	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +rF+P+d el+++ L k v+gk l++ee i +d+y+ ePw+L ++++k yf ++ ++k+++++r nr+t sg W ++ k Niben101Scf06223g00023.1 5 VRFRPSDIELIMQ-LLKYVAGKCLPTEELIVFADVYSKEPWQLIG--DTSKKTHYFLTQLKHKKPSDDRFNRTTCSGSWIQQDKG 86 8********77.667899999999999**********73..34667889999*********************** PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++ ++ g k++L + ++++p+ + +W+++ey l Niben101Scf06223g00023.1 87 QKIHDEdDNLISGYKRSLNYKNKKDPS-LNGRWMIKEYFL 125 *9444558****9777777.89******76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	25.628	1	148	IPR003441	NAC domain
Pfam	PF02365	1.1E-10	4	124	IPR003441	NAC domain
SuperFamily	SSF101941	4.71E-24	5	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MENNVRFRPS DIELIMQLLK YVAGKCLPTE ELIVFADVYS KEPWQLIGDT SKKTHYFLTQ 60 LKHKKPSDDR FNRTTCSGSW IQQDKGQKIH DEDDNLISGY KRSLNYKNKK DPSLNGRWMI 120 KEYFLADSLL QLKSKEAKEF VICAIKKNPR SEVRGNNVAT DIEYKRFIDR VFQEGVFLQT 180 SPSEQSTMML SDNSPVMLES TSTDFFPVEK LEQNDGMLVL ENRIDCDEFF GMLNVENQEC 240 YIQEGDEVEF DWNSILDFGD HGLEENCLLY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009623547.1	1e-144	PREDICTED: NAC transcription factor 56-like
TrEMBL	A0A1S4B1S6	1e-141	A0A1S4B1S6_TOBAC; NAC transcription factor 56-like
STRING	XP_009623547.1	1e-143	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9815	7	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33480.1	3e-14	NAC domain containing protein 41