PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf06749g01004.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 131aa    MW: 15147.4 Da    PI: 10.4127
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf06749g01004.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.77.7e-22141223110
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyW 83 
                               +GfrF+Ptdeel+ +yL k v+ k+ ++ ++i+  d+y   +Pwd+  +++ ++++++ yfF+k ++++a g+r +r  +  g W
  Niben101Scf06749g01004.1  14 VGFRFRPTDEELI-RYLLKFVSCKNYSC-DHIRVEDLYGNkKPWDIFeSNFLGDDTKLnYFFTKLKRTKAGGSRFSRrLIGGGCW 96 
                               7************.9**********999.88**99*996549****6345555666556***************9997999**** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfyk 110
                               k   k+k+v++ +++lvg kk++ + +
  Niben101Scf06749g01004.1  97 KGLDKHKSVFK-GSKLVGSKKSFRYLE 122
                               **********9.9**********9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-2110123IPR003441NAC domain
PROSITE profilePS5100520.20912131IPR003441NAC domain
PfamPF023655.4E-1214121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MTSSSHNYGP NEVVGFRFRP TDEELIRYLL KFVSCKNYSC DHIRVEDLYG NKKPWDIFES  60
NFLGDDTKLN YFFTKLKRTK AGGSRFSRRL IGGGCWKGLD KHKSVFKGSK LVGSKKSFRY  120
LEKGIKNLFG I
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238850.19e-80PREDICTED: NAC domain-containing protein 68-like
RefseqXP_019244620.19e-80PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A1J6KHW82e-78A0A1J6KHW8_NICAT; Nac domain-containing protein 78
STRINGXP_009798779.11e-75(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-17NAC domain containing protein 2