PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf06916g01011.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 150aa MW: 17361.1 Da PI: 10.0059

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf06916g01011.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.9	4.5e-45	9	135	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 pGfrFhPt eel+++yLk+ ++g+ l+ +vi+ v+iy ++Pw+Lp ++ +e+ewyfF++ ++k+ + r+nr+t++g+Wkatg Niben101Scf06916g01011.1 9 PGFRFHPTAEELINFYLKRIIKGNLLDS-SVIAFVNIYLHDPWELPGLARIGEREWYFFVQLNRKHGPKGRPNRTTRNGFWKATG 92 9**********************999.89***********8778899**************************** PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +d ++ s+ +++++glkktLvfy grapkg +tdWvm+eyrl Niben101Scf06916g01011.1 93 SDCQIRSTldSKKVIGLKKTLVFYGGRAPKGCRTDWVMNEYRL 135 **99988999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	46.225	7	150	IPR003441	NAC domain
SuperFamily	SSF101941	1.7E-48	8	140	IPR003441	NAC domain
Pfam	PF02365	1.3E-24	9	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MSLPELELPG FRFHPTAEEL INFYLKRIIK GNLLDSSVIA FVNIYLHDPW ELPGLARIGE 60 REWYFFVQLN RKHGPKGRPN RTTRNGFWKA TGSDCQIRST LDSKKVIGLK KTLVFYGGRA 120 PKGCRTDWVM NEYRLPDGQS LPEVLSFYNL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	4e-41	5	135	12	140	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009757158.1	7e-96	PREDICTED: putative NAC domain-containing protein 94
Swissprot	Q10S65	5e-65	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1U7USG2	2e-94	A0A1U7USG2_NICSY; putative NAC domain-containing protein 94
STRING	XP_009757158.1	3e-95	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	5e-67	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]