PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf07491g00006.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 244aa    MW: 27919.1 Da    PI: 8.6998
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf07491g00006.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.21.3e-09542240
                       NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy 40
                               pGfrFhPt+eel+++yLk+kv g kl++ +vi  ++iy
  Niben101Scf07491g00006.1  5 LPGFRFHPTEEELLQFYLKNKVLGLKLRC-DVIGFLNIY 42
                              59************************999.889888887 PP
2NAM583.4e-184310165121
                       NAM  65 dkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdW 121
                               ++k  +g r+nr+t++g+Wkatg+d++++s    ++ +glkktLvfy+grap+g ktdW
  Niben101Scf07491g00006.1  43 HRKRGSGGRPNRTTQKGFWKATGSDRKIFSLsnPKNIIGLKKTLVFYNGRAPRGCKTDW 101
                               6788899*********************997556677********************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.3351146IPR003441NAC domain
SuperFamilySSF1019412.22E-315111IPR003441NAC domain
PfamPF023651.8E-156101IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MEFALPGFRF HPTEEELLQF YLKNKVLGLK LRCDVIGFLN IYHRKRGSGG RPNRTTQKGF  60
WKATGSDRKI FSLSNPKNII GLKKTLVFYN GRAPRGCKTD WDIVLCKIYR KATSLKVLEQ  120
RAAIDEEMKT TNQPMDTMSF CSENNEVIMA EPITDQSPKF LITKDEVEED ILSITKNNHY  180
DISLEIKGNS NCLNPNFLNG KGNLADIQVP KMSMDFSQDP VWMQLGSPWL DNFSLTPSAF  240
VYNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-21611117168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769046.11e-164PREDICTED: protein FEZ-like
RefseqXP_016468466.11e-164PREDICTED: protein FEZ-like
SwissprotQ10S658e-58NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A1S3ZVP61e-162A0A1S3ZVP6_TOBAC; protein FEZ-like
TrEMBLA0A1U7VVQ91e-162A0A1U7VVQ9_NICSY; protein FEZ-like
STRINGXP_009769046.11e-163(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35312248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.18e-64NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]