PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf07509g01008.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 122aa    MW: 13180.9 Da    PI: 5.4509
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf07509g01008.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82227.69.7e-093410672148
                    DUF822  72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                               g+kp e+a+ +  +a +sp ss+q        ++p +sy++sp+sssfpsp+s+ ++++a++    + l+p+l++ls+ ss
  Niben101Scf07509g01008.1  34 GCKPVERADNICYFAFVSPYSSYQ--------PTPGASYNPSPASSSFPSPVSSHCVTNAQNnpdpNLLIPWLKNLSSGSS 106
                               899999999999999999999999........************************999887899999*******998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.9E-1034102IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MNVPADTCVL LESHIGRVMG WWSPDMYFAG VELGCKPVER ADNICYFAFV SPYSSYQPTP  60
GASYNPSPAS SSFPSPVSSH CVTNAQNNPD PNLLIPWLKN LSSGSSLLHP NFPTICTFPG  120
AL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009785426.11e-20PREDICTED: BES1/BZR1 homolog protein 4-like
TrEMBLA0A1U7X6X63e-19A0A1U7X6X6_NICSY; BES1/BZR1 homolog protein 4-like
STRINGXP_009785426.15e-20(Nicotiana sylvestris)