PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf07883g02005.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 302aa    MW: 34486.3 Da    PI: 5.298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf07883g02005.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.6e-11172216549
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                               kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++
  Niben101Scf07883g02005.1 172 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRV 216
                               899*********************************988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-13168232IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576170222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-12172223No hitNo description
SuperFamilySSF579591.21E-11172226No hitNo description
PfamPF001708.7E-10172216IPR004827Basic-leucine zipper domain
CDDcd147039.20E-22173223No hitNo description
PROSITE patternPS000360175190IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MAHLPPRVPN MTPNWPDFSH HQKIDTNTAG HNPSWVDEFL DFSSTKRGSH RRSISDSIAF  60
LEAPMVEECR RLSTPGKTTG SEFERFDDEQ LMSMFNDDIA NPSSPSDNNS INEEKKMSTI  120
ISTDDQEMQQ QQQELKSEPE EVESLCKSDE QTASDQQATA DNNSSEKIVD PKRIKRILAN  180
RQSAQRSRVR KLQYISELER SVTTLQAEVS VLSPRVAFLD HQRLVLNVDN SVLKQRIAAL  240
AQDKIFKDAH QEALKREIER LRQIYYQQNL KKMEDGTTTP QSKFQPAAVD ANASEQKEQL  300
VN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019254416.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-107BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A1J6HY070.0A0A1J6HY07_NICAT; Basic leucine zipper 34
STRINGXP_009777081.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.24e-93bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]