PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf08137g05017.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 138aa    MW: 15807.5 Da    PI: 4.0878
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf08137g05017.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.23.1e-10127102128
                       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                               +kktLv+y+grap+g +tdW mhey l
  Niben101Scf08137g05017.1   1 MKKTLVYYRGRAPQGIRTDWEMHEYLL 27 
                               8************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.704152IPR003441NAC domain
SuperFamilySSF1019415.89E-14153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MKKTLVYYRG RAPQGIRTDW EMHEYLLDDK ECDEISSIQV QNSYALCRVF KKNGVCSEVE  60
ELGQTSSTVP SFEYPLTQIM NVHEYETPSP DVPLASSSSC MEEEEKDDSW MHFITEDAWC  120
SSNSPFQGEE ISPLAFTN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009790484.11e-84PREDICTED: NAC domain-containing protein 74 isoform X1
RefseqXP_016510514.11e-84PREDICTED: NAC domain-containing protein 86-like isoform X1
TrEMBLA0A1S4DBC92e-83A0A1S4DBC9_TOBAC; NAC domain-containing protein 86-like isoform X1
TrEMBLA0A1U7XU972e-83A0A1U7XU97_NICSY; NAC domain-containing protein 74 isoform X1
STRINGXP_009790484.14e-84(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46212442
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-44NAC domain containing protein 57