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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Niben101Scf08531g03004.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 92aa MW: 10860.3 Da PI: 6.7702 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 32.1 | 3.3e-10 | 4 | 81 | 3 | 75 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrkn 75
GfrF+Ptd+e + +L + v+gk+++ + + ++vd+y k ePw++ + + + e++ yf +k +kk+ + r +
Niben101Scf08531g03004.1 4 LGFRFRPTDSEEL-MFLLRFVTGKEMHDAGFiTTNVDVYgKQEPWEIYdHgvsCGDDEDSTSyrYFITKLKKKS--NARYH 81
6********8877.6999999999988878735677*99456*****744443222233333225555544443..34444 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF101941 | 1.11E-7 | 4 | 82 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 92 aa Download sequence Send to blast |
MEQLGFRFRP TDSEELMFLL RFVTGKEMHD AGFITTNVDV YGKQEPWEIY DHGVSCGDDE 60 DSTSYRYFIT KLKKKSNARY HRSCLLYTSR CV |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_019261439.1 | 5e-52 | PREDICTED: NAC transcription factor 32-like | ||||
| TrEMBL | A0A1J6IHC9 | 4e-49 | A0A1J6IHC9_NICAT; Uncharacterized protein | ||||
| STRING | XP_009603640.1 | 2e-48 | (Nicotiana tomentosiformis) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA2219 | 12 | 54 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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