PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf08711g00019.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 72aa    MW: 8393.68 Da    PI: 11.3645
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf08711g00019.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-1022661357
                              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                              NRe Arr+R +K++ ++ L+++v +L+a Nk+   ++ee +k ++
  Niben101Scf08711g00019.1 22 NREYARRFRMKKQKLVQALTKEVNKLQAANKTIVTKIEETTKSAQ 66
                              9*************************************9999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579595.49E-72264No hitNo description
PfamPF001701.4E-72266IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-72265No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
MSANWDIKNT NLRKGKENNG FNREYARRFR MKKQKLVQAL TKEVNKLQAA NKTIVTKIEE  60
TTKSAQNNIL RA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019225553.17e-18PREDICTED: bZIP transcription factor 44-like
TrEMBLA0A314KT402e-16A0A314KT40_NICAT; Bzip transcription factor 11
STRINGXP_009779504.14e-16(Nicotiana sylvestris)
STRINGXP_009799077.12e-16(Nicotiana sylvestris)