PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf13556g00002.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 221aa    MW: 25507.6 Da    PI: 9.3893
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf13556g00002.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10117162550
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                               ++ rr+ +NRe+ArrsR RK++ +e+L++ +  L+  N+ L ++  
  Niben101Scf13556g00002.1 117 RKHRRMVSNRESARRSRMRKQKHLENLRNQANRLKVGNRVLTNQFR 162
                               689***********************************98886655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-9113177IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.714115178IPR004827Basic-leucine zipper domain
PfamPF001701.3E-7117162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-7117190No hitNo description
SuperFamilySSF579592.04E-10117168No hitNo description
CDDcd147022.56E-15118169No hitNo description
PROSITE patternPS000360120135IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MLSTFPALTL PADGLFTHLF PAFDGGFTSW ECIEPAYLIP QQVEEEPVIS PKESPPPEPV  60
ISNSGSGSDD SKLNFVHSSS GSDEPSQNNS NDNNNRKCCP DKRKRKNTTS NRDIDERKHR  120
RMVSNRESAR RSRMRKQKHL ENLRNQANRL KVGNRVLTNQ FRLMTHQFQL VQCDNERLRT  180
ESALLRQRLE GIRQILLARQ LEQQFNAYSA WACNNMEERP Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129136RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019242815.11e-130PREDICTED: bZIP transcription factor 11-like
TrEMBLA0A1J6JHH61e-128A0A1J6JHH6_NICAT; Bzip transcription factor 2
STRINGXP_009589486.11e-118(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.28e-33basic leucine-zipper 6