PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf16114g00002.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 92aa    MW: 10693 Da    PI: 7.3457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf16114g00002.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.11.1e-08785376
                       NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diy.kvePwdLp.k...kvkaeek.ew.yfFskrdkkyatgkrknr 76
                               GfrF+Pt++e +   L + v+g++++ + +i+++ d+y k ePw++  +   + + +++ ++ yf +k +kk+  + r  r
  Niben101Scf16114g00002.1  7 EGFRFRPTNSEGL-MLLLRFVAGQEMHDAGFITTIiDVYgKQEPWEIYdNgvpCGDDDDStNYrYFITKLKKKS--NARYYR 85
                              7**********98.6788999999988889999988*99456*****744555222333323325555554443..345444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100510.378592IPR003441NAC domain
SuperFamilySSF1019411.02E-5786IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MEQLGQEGFR FRPTNSEGLM LLLRFVAGQE MHDAGFITTI IDVYGKQEPW EIYDNGVPCG  60
DDDDSTNYRY FITKLKKKSN ARYYRSVRNK GT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019261439.14e-56PREDICTED: NAC transcription factor 32-like
TrEMBLA0A1J6IHC93e-55A0A1J6IHC9_NICAT; Uncharacterized protein
STRINGXP_009782736.11e-52(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254