PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf16613g03001.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 170aa    MW: 19734.7 Da    PI: 8.8727
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf16613g03001.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.12.8e-0918571050
                       NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                              + eel  +yL++k++g++++    i+++d+ykvePwdLp+ 
  Niben101Scf16613g03001.1 18 RREELGRYYLRRKITGRPIKS-APISDIDLYKVEPWDLPEY 57
                              5699**************999.78**************942 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-91958IPR003441NAC domain
PfamPF121747.9E-966101IPR022003RST domain of plant C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MESRGSLESL AAGSDFTRRE ELGRYYLRRK ITGRPIKSAP ISDIDLYKVE PWDLPEYQRN  60
GVPAKNPNSP WISFPALISA LSKFLLPHTI KLITKYHCDH KMLWERLITL LQLSTTSSPD  120
MEKEYRCRRF ENRRVESCFF HLSYVALTWQ FMYCVDNMGD AFGNGGGMTI