PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf32851g00038.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 752aa    MW: 81228 Da    PI: 7.0265
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf32851g00038.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.3e-14272329562
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                               kr  r+++NRe+A+ sRqRKk ++eeLe+kv ++ +  ++L  +++ +  e a+l+s+
  Niben101Scf32851g00038.1 272 KRKARLMRNRESAQLSRQRKKHYVEELEDKVRTMHSTIQDLNAKISYIMSENATLRSQ 329
                               999**************************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-15268332IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714270333IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-12272330No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-16272330No hitNo description
PfamPF001702.4E-12272329IPR004827Basic-leucine zipper domain
CDDcd147041.81E-20273324No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MANPLVADPH MPPANDFADA SDPPLGQGNS NNSSYVICDE AFNKEFMFDD LDFDLDIIFP  60
PDDAAILNNP NSLETGQIDP NGFGQQLIQG FNDSSRIFKS SPELRHVSVA RGTSEACHSS  120
GGQTSSGSLV LTAVSNQNSD VSAYLNVPSP TESNGSNHED SGNDCKEGSH DSNCPSPESQ  180
GSGNCGSHVS EEAFNCPSKS VTSSPIKRGV VVEQNIIKLE EMMNTKDNNK CGSILKRKKV  240
SEEDSNNVSK YQKSNYVAEC SKVFNSEGGD EKRKARLMRN RESAQLSRQR KKHYVEELED  300
KVRTMHSTIQ DLNAKISYIM SENATLRSQM GPVPSQMPPP PPGMFPVMYP WMPCAPPYMV  360
KPQGSQVPLV PIPRLKPQAA APAPKGSKKV EIKKTEMKTK KVASVSFLGL LFFMLLFGGL  420
VPVINTRYEG VREPFTSGDI SGSGHNERHR GRILAVDGQV SGSSYSRKHN GRDYGTNCGQ  480
RGQGGDDQQN FNSGTDGFVR SGNDSEPLMA SLYVPRNDKL VKIDGNLIIH SVLASEKAMA  540
SHRSEDKKNS GETGLAVPGD LAPAIPGRHS HHYRSPANGK RALGSGDKEK AKSTVQQWFL  600
EGVAEPMLSS GMCTEVFQFD VSSSPGGIVP VTTVRNVTME QRQNATTHTN KGRNRRILNS  660
LSVPVSGVTH NISEEHVGGS GKKDDFTGNN LLSSMVVSVL VDPREAGDGD GDGMMGPKSI  720
SQIFVVVLID SVKYVTYSCM LPVKGSVPLV TT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019239534.10.0PREDICTED: bZIP transcription factor 17-like
TrEMBLA0A1J6JT850.0A0A1J6JT85_NICAT; Bzip transcription factor 17
STRINGXP_009800139.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30292450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-132bZIP family protein