PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB01G44130.1
Common NameLOC102700859
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 270aa    MW: 29404.9 Da    PI: 7.8151
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB01G44130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY772.2e-2450110258
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 
                   +Dgy+WrKYGqK+++g+ fpr YYrCt++   gCp+ k+ve+  +edp ++ ++Y +eH++
  OB01G44130.1  50 HDGYQWRKYGQKMIRGNVFPRCYYRCTYHqdhGCPASKHVEQHnSEDPPLFRVIYANEHTC 110
                   7***************************98999*******9852689************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-2440110IPR003657WRKY domain
SuperFamilySSF1182901.44E-2243110IPR003657WRKY domain
SMARTSM007749.8E-3549112IPR003657WRKY domain
PfamPF031062.0E-2451110IPR003657WRKY domain
PROSITE profilePS5081119.89851113IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MAKKSDSLQV SSRGTHKRVL KDGTGGYANE NTMKKVCTGT RTEYTYAPYH DGYQWRKYGQ  60
KMIRGNVFPR CYYRCTYHQD HGCPASKHVE QHNSEDPPLF RVIYANEHTC VAAGASASDY  120
MASSMKIQQI ADASLRRPEV DERPPRLDDE ARRGGGYAYD MAAAMKEEKD AIVSSLLTVI  180
RGGGHVAGSG TSNDGTAAAA AATLLPASSC RTAAPLSPPP VARSNRRRSC GGGGSVVSPA  240
SDDLELLDFT LESVLEPHWV EPLDLAWFKE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00066PBMTransfer from AT1G66600Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB01G44130.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006646437.10.0PREDICTED: probable WRKY transcription factor 63
TrEMBLJ3L5A70.0J3L5A7_ORYBR; Uncharacterized protein
STRINGOB01G44130.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66600.13e-21ABA overly sensitive mutant 3