PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB02G29010.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 430aa    MW: 46748.9 Da    PI: 4.3633
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB02G29010.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3108.71.1e-33202303183291
                   HHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXX CS
          EIN3 183 elg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsc 278
                   ++g ++++qg+ppy+kphdlkkawk+s+L+avikhmsp+ +++r+l++qsk+lq+kms kes+++++vl+qee++ ++++++ +      + +   +
  OB02G29010.1 202 AVGeMQAHQGAPPYRKPHDLKKAWKISLLSAVIKHMSPRYDQMRKLVWQSKRLQQKMSVKESDTWSKVLRQEEALNRRLKSSLQI-----TPL---D 290
                   567789999*****************************************************************99988877532.....222...2 PP

                   XXXXXXXXXXXXX CS
          EIN3 279 eqkedvegkkesk 291
                   ++++d ++k++  
  OB02G29010.1 291 GDEDDDDEKDNDG 303
                   2222222222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.4E-28201274No hitNo description
Gene3DG3DSA:1.10.3180.104.9E-31207283IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.01E-26208277IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MERVAEDQYG RGGGDGEQED AAADAPELEQ EELSDSESGS ESIEISDLKK RMWKDQMLLM  60
KLEGRAGGGR GVGAAAAAAG MSVGGEGAGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA  180
AAAQLPAGAR AGAAVVADGA GAVGEMQAHQ GAPPYRKPHD LKKAWKISLL SAVIKHMSPR  240
YDQMRKLVWQ SKRLQQKMSV KESDTWSKVL RQEEALNRRL KSSLQITPLD GDEDDDDEKD  300
NDGLEDVVRG AQDKRKREYT RSDSGSSSSS SSGGKFPRPS GGGGGGELEL QLPIILPELA  360
ADEGRSPINE LMKLYYSCLE GAGGAEGDLA ALVPLPPEVL VGVDEVAQDV LFDIIGSCPE  420
VDDVSRLMDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-2021028060130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-2021028060130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB02G29010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126101e-129CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015688644.11e-132PREDICTED: uncharacterized protein LOC102710562
TrEMBLJ3LE341e-129J3LE34_ORYBR; Uncharacterized protein
STRINGOB02G29010.11e-130(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.12e-24EIL family protein