 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OB02G33290.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
HB-other |
| Protein Properties |
Length: 205aa MW: 22938.4 Da PI: 7.8108 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB02G33290.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 17.3 | 8.1e-06 | 54 | 67 | 43 | 56 |
HHHHHHHHHHHHHH CS
Homeobox 43 qVkvWFqNrRakek 56
+ +WFqN+Ra+++
OB02G33290.1 54 RTAIWFQNKRARWR 67
5679*********9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MAVAGRRSGG SRMSRCGLWS RRSTRGARSW SPGRRRSWRG NWGCSRAREP SGSRTAIWFQ 60
NKRARWRSKQ IEHDYAELRA KYDALHTRVE SLKQEKLALA AQVDELRGRL NERQDQSGSC 120
DGGAECDDDK IRNNTVNASI SGLVEEDVSC VAVPVMDFSE DGSAVSGGYD YDHHIDYAGG 180
GLPEPFCAIP DLWDTWPMVE WNAVA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK063685 | 1e-114 | AK063685.1 Oryza sativa Japonica Group cDNA clone:001-119-F01, full insert sequence. |
| GenBank | EU847515 | 1e-114 | EU847515.1 Oryza sativa Japonica Group clone OsHD6B homeobox leucine zipper protein mRNA, complete cds. |
