PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OB02G45490.1

Common Name

LOC102715456

Organism

Oryza brachyantha

Taxonomic ID

4533

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 141aa MW: 15109.1 Da PI: 9.3149

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OB02G45490.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.6	4.8e-17	67	126	1	60
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 e+e ++++r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk ++lk e+a+l OB02G45490.1 67 EEEERKTIRMMKNRESALRSRARKRAYVQELEKEVHRLVNENLKLKRHCKQLKTEMAALI 126 678899***********************************************9999885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-17	65	126	No hit	No description
PRINTS	PR00041	2.4E-5	66	82	IPR001630	cAMP response element binding (CREB) protein
Pfam	PF00170	1.9E-14	67	125	IPR004827	Basic-leucine zipper domain
SMART	SM00338	1.4E-14	67	131	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.484	69	125	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.9E-13	71	127	No hit	No description
CDD	cd14707	7.29E-16	71	125	No hit	No description
PRINTS	PR00041	2.4E-5	84	104	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	2.4E-5	104	121	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MADQLGGMGS PQLSLSSCSS FLSISSAGNS AADGAPHLSL GVGGAEELDL LMQVGIGGGG 60 GGGGDEEEEE RKTIRMMKNR ESALRSRARK RAYVQELEKE VHRLVNENLK LKRHCKQLKT 120 EMAALIQPTT KQSSHRRSSS T

Cis-element ? help Back to Top
Source	Link
PlantRegMap	OB02G45490.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK061086	0.0	AK061086.1 Oryza sativa Japonica Group cDNA clone:006-206-G05, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006648186.1	1e-97	PREDICTED: protein FD-like
TrEMBL	J3LIT2	2e-96	J3LIT2_ORYBR; Uncharacterized protein
STRING	OB02G45490.1	4e-97	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4017	30	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	2e-13	bZIP family protein

Link Out ? help Back to Top
Entrez Gene	102715456