PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB03G42590.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 191aa    MW: 21242.3 Da    PI: 5.9309
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB03G42590.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.1e-1062102141
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                   e+e++r+rrk++NR++A+rsR+RK+ ++eeL+e ++ L ae
  OB03G42590.1  62 EEERRRQRRKISNRLSAQRSRARKQRRLEELRETSARLRAE 102
                   7899**********************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-859102No hitNo description
PfamPF001701.9E-662102IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.59964127IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-666104No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
CDDcd147021.93E-971102No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MLPVHEALDF DLDVMTSGFG FTPWAPDTCP TLEQLMATAA SPASTSSDDV SAACGGGTVE  60
EEEERRRQRR KISNRLSAQR SRARKQRRLE ELRETSARLR AESXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX PPPPPGGAPG  180
AAAAVLASLM A
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB03G42590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008665488.17e-26ocs element-binding factor 1-like
TrEMBLJ3LT831e-64J3LT83_ORYBR; Uncharacterized protein
STRINGOB03G42590.12e-65(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429