PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB04G22040.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 322aa    MW: 35840.8 Da    PI: 5.1129
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB04G22040.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN371.22.7e-2262136273
                   XXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa...tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfv 73 
                   +lkkrmwkdqmll++l++r+ +  ++  ++    +++++++++ ++rrk+m raQDg+L++Mlk+me+cna+G v
  OB04G22040.1  62 DLKKRMWKDQMLLMKLEGRSGHDGHRPGQDrarGKEEEEETPEARYRRKAMLRAQDGVLRHMLKMMEACNARGAV 136
                   8*******************99876554444446666777999******************************87 PP
2EIN346.68.5e-15135186212263
                   HHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
          EIN3 212 avikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                   avikh+sp++++ir+l++qsk+lq++msa++ +++++v++qee++ ++ + +
  OB04G22040.1 135 AVIKHLSPRFDQIRKLVWQSKRLQHRMSARDADTWSRVISQEEALSRHAQRS 186
                   79*****************************************987654433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.3E-2062136No hitNo description
SuperFamilySSF1167682.09E-14122180IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.102.8E-16122185IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048732.1E-11135177No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MESLGHRLKQ KPPALEPLPR PAAAVDEGKD KDEAAPEPEQ EQPQEEFFSE SESGSESIEI  60
ADLKKRMWKD QMLLMKLEGR SGHDGHRPGQ DRARGKEEEE ETPEARYRRK AMLRAQDGVL  120
RHMLKMMEAC NARGAVIKHL SPRFDQIRKL VWQSKRLQHR MSARDADTWS RVISQEEALS  180
RHAQRSLHIV PLDDDDQELH GPSPRESHAG KRKREAGGGE LQLSLPADGH VVTEADRSSI  240
DELMKLYYSC LQGADGGLGG EQGKDVAAGA AWEEGVSPDT VHGGDAPQPH DDMLDDLLGV  300
AHVVDMSDFP DSPIWHWGSG SD
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB04G22040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAL6066361e-124AL606636.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence.
GenBankAP0149601e-124AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015691482.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLJ3LYH90.0J3LYH9_ORYBR; Uncharacterized protein
STRINGOB04G22040.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.17e-12EIL family protein