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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
OB06G10370.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
GRAS |
| Protein Properties |
Length: 419aa MW: 44741.6 Da PI: 6.657 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OB06G10370.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 184.7 | 6.2e-57 | 63 | 418 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel...aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
lv+ Ll++A+ +++gd + a +Larl+++ p g p+ R+aa + AL + l+ ++ ++s +s+ ++ +laa+k++ ++sP+++f
OB06G10370.1 63 LVDELLDAARRLHAGDSTSAMGILARLNHRlpsLPPPGhPPLLRAAALLRDALLRLLQP----TALPHQASVSSPLDVPLKLAAHKALADASPTVQF 155
5789*************************987644555489**************9999....333334444444569999**************** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
+ +t qa l+a+ ++rvH D p+L+q+La + +pp+l++T+++sp + + el+ t e L++fA+elg+ fef++l+ +
OB06G10370.1 156 ASFTSTQAFLDALGAARRVHLPDXXXLG----PPLMQELAHQWrraavpLPPPTLKVTALVSPGTRHPLELHLTYESLTRFAAELGIAFEFTALAFD 248
***********************87654....89******644334655679************99***************************9777 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
l++ + L +Ea+aV+l ++ + ++ L++vk+l+P vvv+v++ +++++ ++ ++ l+ l+ +al++sl++ ++ +
OB06G10370.1 249 PLSASPPMGL---ADEAVAVHLPAGSATFS--------PAPAHLRVVKELRPAVVVCVDHGCERGDLPLPHHALNLLRSSAALLESLDTA-GASPDV 333
7777766666...8**********999997........56789********************************************999.667799 PP
GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+k+E+++l+++++ +a g++ l ++++ + GF p++ls+ a++qa++llr+++++g++ve+++++l l W++ +LvsvSaWr
OB06G10370.1 334 VSKIEQFILRPRVEH-LALGGDK-------LPPLQSMFASGGFAPLQLSNAAEAQAECLLRRTANHGFHVEKRQAALALWWQRSELVSVSAWR 418
9******99999987.5777776.......8999**********************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MVTPAALPQD SSFLRWIMDA RSADGDGDGD AFGFKGPAFP DPFDSLLPPP PQDDPPQAQA 60
QALVDELLDA ARRLHAGDST SAMGILARLN HRLPSLPPPG HPPLLRAAAL LRDALLRLLQ 120
PTALPHQASV SSPLDVPLKL AAHKALADAS PTVQFASFTS TQAFLDALGA ARRVHLPDXX 180
XLGPPLMQEL AHQWRRAAVP LPPPTLKVTA LVSPGTRHPL ELHLTYESLT RFAAELGIAF 240
EFTALAFDPL SASPPMGLAD EAVAVHLPAG SATFSPAPAH LRVVKELRPA VVVCVDHGCE 300
RGDLPLPHHA LNLLRSSAAL LESLDTAGAS PDVVSKIEQF ILRPRVEHLA LGGDKLPPLQ 360
SMFASGGFAP LQLSNAAEAQ AECLLRRTAN HGFHVEKRQA ALALWWQRSE LVSVSAWRC
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