PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G13500.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 76aa    MW: 8416.78 Da    PI: 10.7907
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G13500.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.49e-131256145
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePw 45
                  lppGfrF+Ptdeelvv+yL++++ +++l+ +  i++v+++ v P 
  OB07G13500.1 12 LPPGFRFRPTDEELVVHYLRRRALDTPLPPAVDIPDVRLLAVSPA 56
                  79*************************988556*******99996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-14756IPR003441NAC domain
PROSITE profilePS5100514.2491276IPR003441NAC domain
PfamPF023653.0E-81349IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MDTKECAARR ALPPGFRFRP TDEELVVHYL RRRALDTPLP PAVDIPDVRL LAVSPAAPRT  60
PPPWTATMKP SSTAAR
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G13500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664550.11e-28PREDICTED: NAC domain-containing protein 68
TrEMBLJ3MIW84e-45J3MIW8_ORYBR; Uncharacterized protein
STRINGOB07G13500.17e-46(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63173254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-11NAC domain containing protein 41