PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G17120.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 128aa    MW: 14287.3 Da    PI: 10.4269
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G17120.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN335.52e-1120107169263
                   HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
          EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                   +pPWWP+G+e ww+elg  +  ++ppyk       + kv    a +k ++p+ e++        ++ + ++  e  a+ + + +e++ +   +++
  OB07G17120.1  20 PPPWWPNGRERWWHELG--EGVEAPPYKPA-----RAKVVAVVAMVKNIAPDYERLAMAMQMASSVTSIITDAEAMAWDAGVTRERDAYIARHPR 107
                   8*************877..566789***99.....556666678899********9999999999999999999999999999999877555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1167681.27E-2217101IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.101.2E-1918106IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.6E-92097No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MKIEWPTLPH LTNNSRYPAP PPWWPNGRER WWHELGEGVE APPYKPARAK VVAVVAMVKN  60
IAPDYERLAM AMQMASSVTS IITDAEAMAW DAGVTRERDA YIARHPRSAP PTSGPGRGRS  120
CGPSSRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G17120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646400.27e-32uncharacterized protein LOC107276281
TrEMBLJ3MJY05e-87J3MJY0_ORYBR; Uncharacterized protein
STRINGOB07G17120.18e-88(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP159701112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-06EIL family protein