PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G20950.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 216aa    MW: 22804.5 Da    PI: 9.5801
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G20950.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.76.7e-0855125567
           NAM   5 frFhPtdeelvveyLkkkvegkklel..eevikev.diykvePwdLpkkvka.....eekewyfFskrdkk 67 
                   + F P+d+el+++ L++k++g +++   +e +  v d+y + P +L +++++     + + wyfF++  ++
  OB07G20950.1  55 VPFLPQDSELLDCLLRPKIAGAHIDSrfTELVGYVdDVYALPPDQLAARHEGapgegGGRVWYFFAPLGTA 125
                   5699*******************65521455788889*********853333344447789****986654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-955128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MAATLPRTSD SDWTDSDSNS IQFAYKLAPS SSARRRIHLA SSSSHRLKTT VMAPVPFLPQ  60
DSELLDCLLR PKIAGAHIDS RFTELVGYVD DVYALPPDQL AARHEGAPGE GGGRVWYFFA  120
PLGTARGRTE NGGEGGAELL LCKIFRAPRA ARAEPGSPSS CKSVSASPSA SCSGTGSGGR  180
KRKAEGDHLE ASTTLDARAA LPAKSRSTQA GRGQHR
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G20950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLJ3ML131e-154J3ML13_ORYBR; Uncharacterized protein
STRINGOB07G20950.11e-155(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017