PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G21020.1
Common NameLOC102701093
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 238aa    MW: 24877.9 Da    PI: 8.7166
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G21020.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.38.2e-1251336128
           NAM   6 rFhPtdeelvveyLkkkvegkklel..eevikev.diykvePwdLpkkvka.....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    F P+d+el+++ L++k++g +++   +e +  v d+y + P +L +++++     +++ wyfF++  ++     r+       +W + g+ k+v  
  OB07G21020.1   5 PFLPQDSELLDCLLRPKIAGAHIDSrfTELVGYVdDVYALPPDQLAARHEGtpgegGDRVWYFFAPLGTARG---RTVGGDGGKRWCSVGSRKKVEG 98 
                   599*******************65521455788889*********85333334444888*******987643...3443334557**********99 PP

           NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      g+  +  + L + +++a+  +   W+m +y++
  OB07G21020.1  99 GgAGAGGWYCQKLRYTEKTASGVVAPGWMMAQYSV 133
                   633444567899****99999999*********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.8471153IPR003441NAC domain
SuperFamilySSF1019416.8E-205153IPR003441NAC domain
PfamPF023652.5E-75132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MAPVPFLPQD SELLDCLLRP KIAGAHIDSR FTELVGYVDD VYALPPDQLA ARHEGTPGEG  60
GDRVWYFFAP LGTARGRTVG GDGGKRWCSV GSRKKVEGGG AGAGGWYCQK LRYTEKTASG  120
VVAPGWMMAQ YSVAQEKGGE GGAELLLCKI FRSPRAEPGS PSSSKSASAS PSASCSGTGS  180
GGRKRKAKGD HLEAPPPSTR TQPFPPNAEA LKPEGAAPMN STANSAGSLL LNTSWHFD
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G21020.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658578.11e-173PREDICTED: NAC domain-containing protein 72-like
TrEMBLJ3ML201e-172J3ML20_ORYBR; Uncharacterized protein
STRINGOB07G21020.11e-173(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017