PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G32250.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 374aa    MW: 40607.9 Da    PI: 4.6835
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G32250.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3159.15.3e-4946251185354
                   T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX..XXXXXXXXXXXX CS
          EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss..slrkqspkvtls 277
                    ++++ g+ppykkphdlkkawkv+vLtavikhmsp++e++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++   ++  s   ++ ++++s
  OB07G32250.1  46 PAQQELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVEKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGacPPplSAAAGAISFNAS 142
                   3778888***********************************************************************98744567777******** PP

                   XXXXXXXXXXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXX.XXXXXX........XXXXXXX.XXXXX CS
          EIN3 278 ceqkedvegkkeskikhvqavktta.............................gfpvvrkrkkkpses.akvssk..evsrtcqssqfrgseteli 342
                    + ++dv+g +  +  + q+    a                             ++++v+kr ++ +++ + + s+    ++tc++ q+++s+++l+
  OB07G32250.1 143 ISGEYDVDGVDGDEAGNLQKAPSDAtafmdltmdaalsnkflimpaalmkeeaiDVDFVQKRSAPAADEpELMLSNsnTRIYTCDNVQCPHSNYALG 239
                   ********666666566666555556789**********************************887654244444322678**************** PP

                   XXXXXXXXXXXX CS
          EIN3 343 fadknsisqney 354
                   f d+n+++ ++y
  OB07G32250.1 240 FLDRNERNAHQY 251
                   **********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.0E-2942115No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-3550124IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.72E-2851118IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MMGAAVTMVD RRMSFAAEAD GDSKAAFGFF GGECFMGEGD LVNPAPAQQE LGPPPYKKPH  60
DLKKAWKVAV LTAVIKHMSP DVEKVRRLVR QSKCLQDKMT AKEIVTWLAV LKQEEDLYLK  120
LHPGACPPPL SAAAGAISFN ASISGEYDVD GVDGDEAGNL QKAPSDATAF MDLTMDAALS  180
NKFLIMPAAL MKEEAIDVDF VQKRSAPAAD EPELMLSNSN TRIYTCDNVQ CPHSNYALGF  240
LDRNERNAHQ YACKHNNAAE SKAPPHLFEP LAGFDFDLPV DGQRCLAGLM TMYDADVATQ  300
RNDTLINNAM QQQQQQVNFF IRDDAPFGGD VAAAAPAPEF RLSSSFNVSG GGAVEYGGAM  360
QQPPAKYAGS YWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-315212361132Protein ETHYLENE INSENSITIVE 3
4zds_B2e-315212361132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G32250.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0749720.0AB074972.2 Oryza sativa Japonica Group OsEIL2 mRNA for ethylene-insensitive-3-like protein, complete cds.
GenBankAP0038180.0AP003818.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1200_C08.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658979.10.0PREDICTED: protein ETHYLENE INSENSITIVE 3-like
SwissprotQ8W3L91e-173EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLJ3MP930.0J3MP93_ORYBR; Uncharacterized protein
STRINGOB07G32250.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.13e-54EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]