PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OB07G32300.1

Organism

Oryza brachyantha

Taxonomic ID

4533

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 163aa MW: 18160.6 Da PI: 10.7988

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OB07G32300.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.6	3.7e-15	72	114	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L++ OB07G32300.1 72 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 114 79***************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.7E-14	65	115	No hit	No description
SMART	SM00338	9.9E-16	68	137	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	70	115	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-12	72	115	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.75E-12	72	117	No hit	No description
CDD	cd14707	9.49E-19	72	116	No hit	No description
PROSITE pattern	PS00036	0	75	90	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MGVHTMSGGG SGGGGALSRQ GSVYSLTLNE VESHLGEPLR SMNLDDLLRT VAGRKRGASA 60 GADRVVEKTV ERRQKRMIKN RESAARSRAR KQAYTNELEN KISRLEEENQ RLREQKAVAD 120 FSTFPSCVDF LKAFLTQKLE PVMQIVPQPE PKQQLRRTNS ASF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	74	RKRGASAGADRVVEKTVERRQK

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	OB07G32300.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK110915	1e-140	AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015694773.1	1e-100	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	7e-31	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	J3MP98	1e-115	J3MP98_ORYBR; Uncharacterized protein
STRING	OB07G32300.1	1e-116	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-24	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]