PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OB09G20300.1

Common Name

LOC102701103

Organism

Oryza brachyantha

Taxonomic ID

4533

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 182aa MW: 20500.9 Da PI: 7.8843

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OB09G20300.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40	8.5e-13	83	137	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 e +r rr+++NRe+ArrsR RK+ ++ eL+ v L N++L +el++ ++ OB09G20300.1 83 EERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLLDELNQAMRGCS 137 67899******************************************99887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-10	78	134	No hit	No description
SMART	SM00338	6.5E-15	81	145	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.0E-10	82	137	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.553	83	134	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.04E-10	85	134	No hit	No description
PROSITE pattern	PS00036	0	88	103	IPR004827	Basic-leucine zipper domain
CDD	cd14702	4.23E-14	90	134	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
MLQHHYYGEV ASLHCLSPPS LPFSSHYHSS NMITTMPSSP FHFPAATICE PIQEVLPVAA 60 AAGNCPAGSG STDDAYQMAA AEEERRRRRM ISNRESARRS RMRKQRQLSE LRGQVVHLRD 120 ANRRLLDELN QAMRGCSDVH CENGRLRKER AELQARLEHL MQGQKNTSPS SSSEPCENND 180 TE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	104	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	OB09G20300.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006660738.1	1e-133	PREDICTED: basic leucine zipper 43-like
TrEMBL	J3MYF1	1e-132	J3MYF1_ORYBR; Uncharacterized protein
STRING	OB09G20300.1	1e-132	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1186	35	126

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G38800.1	2e-09	basic leucine-zipper 43

Link Out ? help Back to Top
Entrez Gene	102701103