 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OBART06G13470.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ZF-HD |
| Protein Properties |
Length: 222aa MW: 23019.9 Da PI: 7.6434 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OBART06G13470.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 33.5 | 1e-10 | 100 | 119 | 34 | 53 |
ZF-HD_dimer 34 eegtaaalkCaACgCHRnFH 53
e +++++lkCaACgCHRnFH
OBART06G13470.1 100 EPADPTSLKCAACGCHRNFH 119
44789*************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MKLSMFATAA AAAADRSRGG GGKHGVRAAS RVGATGGVVA GDMAKVELVL YPSVATAATS 60
TAGGGRRRDG VPGVPQEPRS EPGRTRAGRL RGVHAVVAGE PADPTSLKCA ACGCHRNFHC 120
WLLEGSPPPP PPLALPAPPM PANVLHGQLH REEETPEVRL PGVDGDEFDN NSDGSEYYDE 180
RSVSPPSPPH LPAAVVHQPY YPSAQHMLLS LGSSGQAQRL PL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP005449 | 0.0 | AP005449.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0427E01. |
| GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
