PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART06G27730.1
Organism
Oryza barthii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 139aa    MW: 15040.8 Da    PI: 4.9776
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART06G27730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.84.7e-1393124334
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                      +++r++r+++NRe+A rsR+RK+a++eeLe++
  OBART06G27730.1  93 DDRRTIRMMRNRESALRSRARKRAYVEELEKE 124
                      589**************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.55493124IPR004827Basic-leucine zipper domain
PfamPF001701.2E-994124IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-895129No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-995124No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MANYHHQEYY QMAAAAVAWP REPDSPQLSI MSGCSSLFSI STLRDDDDGG VRLAGAALPA  60
TPVSLAGIAG GASTPGGDEV DMEVRQQSGG SGDDRRTIRM MRNRESALRS RARKRAYVEE  120
LEKEGSGMRE DIVCRCMAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8347450.0CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence.
GenBankCT8347470.0CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence.
GenBankCT8347480.0CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.12e-78ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0D3GKY31e-96A0A0D3GKY3_9ORYZ; Uncharacterized protein
STRINGOBART06G27730.12e-97(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.17e-09abscisic acid responsive elements-binding factor 2